sbSchemaParser.pl Perl Code Documentation

sbSchemaParser.pl Perl Code Documentation

podmd.pl Perl Code Documentation

Website: Header for Web Pages

The YAML headers are necessary to process the Markdown (or HTML) files in the page collections. The Progenetix Jekyll template uses standard Jekyll headers, but also adds some additional parameters.

Website: Directories and Files

The Progenetix Jekyll template modifies the standard Jekyll file structure.

Website: Add and Edit Pages

New pages are added to the website inside one of the “collections” directories in the / directory. This can either be done by adding files locally or on Github (if hosted there).

Local Jekyll based website generation

In an ideal scenario, your Github served website could be build locally, with the same output structure and layout.

SchemaBlocks Repositories

The SchemaBlocks Github organisation contains several specifically scoped repositories. Please use the relevant Github Issues to and/or GH pull requests comment and contribute there.

SchemaBlocks “Status” Levels

SchemaBlocks schemas (“blocks”) provide recommended blueprints for schema parts to be re-used for the development of code based “products” throughout the GA4GH ecosystem. We propose a labeling system for those schemas, to provide transparency about the level of support those schemas have from {S}[B] participants and observers.

ProgenetixTemplate::podmd.pl Perl Code Documentation

ProgenetixTemplate::bootstrap_site.pl Perl Code Documentation

Current {S}[B] Repository Status

Recently, repository structure, schema formats and the amount of schema blocks represented in the repositories have seen some maturation and expansion. The current setup is closing in on moving from an “experimental state” towards production readiness, i.e. a stable format for general document structure, canonical links and also frozen representation of first core schemas.