Metadata sb-phenopackets

{S}[B] Status [i]
implemented
Provenance
Used by
Contributors
Source (v1.0.0)

Attributes

Type: object
Description: metadata

Properties

Property Type
created string
createdBy string
externalReferences array of "https://schemablocks.org/schemas/sb-phenopackets/v1.0.0/ExternalReference.json [SRC] [HTML]"
phenopacketSchemaVersion string
resources array of "https://schemablocks.org/schemas/sb-phenopackets/v1.0.0/Resource.json [SRC] [HTML]"
submittedBy string
updates array of "https://schemablocks.org/schemas/sb-phenopackets/v1.0.0/Update.json [SRC] [HTML]"

created

ISO8601 UTC timestamp for when this phenopacket was created in ISO “2018-03-01T00:00:00Z”

created Value Example
"2018-03-01T00:00:00Z"

createdBy

some kind of identifier for the contributor/ program

createdBy Value Example
"samuel_jackson"

externalReferences

External identifiers for this message. These are considered different representation of the same record, not records which are in some other relation with the record at hand. For example this might be a PubMed reference to a study in which the individuals are reported.

externalReferences Value Example
[
   {
      "description" : "Cellosaurus cell line identifier",
      "id" : "cellosaurus:CVCL_0312"
   }
]

phenopacketSchemaVersion

Used to create this phenopacket

phenopacketSchemaVersion Value Example
"1.0.2"

resources

A listing of the ontologies/resources referenced in the phenopacket

resources Value Example
[
   {
      "id" : "12345",
      "name" : "The Human Phenotype Ontology",
      "url" : "http://purl.obolibrary.org/obo/hp.owl"
   },
   {
      "id" : "12345",
      "name" : "The Human Phenotype Ontology",
      "url" : "http://purl.obolibrary.org/obo/hp.owl"
   }
]

submittedBy

Information about the person/organisation/network that has submitted this phenopacket

submittedBy Value Example
"add example"

updates

ISO8601 UTC timestamps at which this record was updated, in the format YYYY-MM-DDTHH:MM:SS.SSSZ e.g. 2007-12-03T10:15:30.00Z

updates Value Example
[
   {
      "timestamp" : "2007-12-03T10:15:30.00Z"
   }
]

Metadata Value Examples

{
   "created" : "2016-06-29T12:03:03.240Z",
   "updates" : [
      {
         "timestamp" : "2007-12-03T10:15:30.00Z"
      }
   ]
}
{
   "created" : "2016-06-29T12:03:03.240Z",
   "createdBy" : "samuel_jackson",
   "resources" : [
      {
         "id" : "geno",
         "iriPrefix" : "http://purl.obolibrary.org/obo/GENO_",
         "name" : "Genotype Ontology",
         "namespacePrefix" : "GENO",
         "url" : "http://purl.obolibrary.org/obo/geno.owl",
         "version" : "19-03-2018"
      }
   ],
   "updates" : [
      {
         "timestamp" : "2007-12-03T10:15:30.00Z"
      }
   ]
}