Procedure sb-phenopackets

{S}[B] Status [i]
implemented
Provenance
Used by
Contributors
Source (v1.0.0)

Attributes

Type: object
Description: A clinical procedure performed on a subject. By preference a single concept to indicate both the procedure and the body site should be used. In cases where this is not possible, the body site should be indicated using a separate ontology class.

Properties

Property Type
bodySite https://schemablocks.org/schemas/sb-phenopackets/v1.0.0/OntologyClass.json [SRC] [HTML]
code https://schemablocks.org/schemas/sb-phenopackets/v1.0.0/OntologyClass.json [SRC] [HTML]

bodySite

FHIR mapping - Procedure.bodySite

bodySite Value Example
{
   "id" : "UBERON:0003403",
   "label" : "skin of forearm"
}

code

FHIR mapping - Procedure.code

code Value Example
{
   "id" : "NCIT:C28743",
   "label" : "Funch Biopsy"
}

Procedure Value Example

{
   "bodySite" : {
      "id" : "UBERON:0003403",
      "label" : "skin of forearm"
   },
   "code" : {
      "id" : "NCIT:C28743",
      "label" : "Funch Biopsy"
   }
}