ga4gh-schemablocks.github.io

beacon-v2 VariantReponseResults [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 VariantInterpretationResponseResults [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 VariantInterpretationResponseContent [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 VariantInterpretationResponse [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 VariantInterpretationFields [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 VariantInSampleResponseResults [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 VariantInSampleResponseContent [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 VariantInSampleResponse [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 VariantInSampleFields [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 VariantAnnotation [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 Variant [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 RunResponseResults [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 RunResponseContent [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 RunResponse [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 RunFields [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 ResponseMeta [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 RequestedSchemas [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 RequestQuery [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 RequestMeta [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 RequestDatasets [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 Request [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 ReferenceBases [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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Rahel Paloots

Department of Molecular Life Sciences
University of Zurich
Swiss Institute of Bioinformatics SIB

2021-03-15: more ...

beacon-v2 Pagination [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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Michael Baudis

Professor of Bioinformatics University of Zurich Swiss Institute of Bioinformatics Co-chair GA4GH Discovery Co-lead SchemaBlocks initiative Co-lead ELIXIR Beacon

2018-12-11: more ...

Marc Fiume

Co-chair GA4GH Discovery
Assistant Professor, OICR
CEO, DNAstack

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beacon-v2 InteractorResponseResults [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 InteractorResponseContent [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 InteractorResponse [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 InteractorFields [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 InfoResponseResults [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 InfoResponseMeta [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 InfoResponseContent [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 InfoResponse [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 InfoRequestedSchemas [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 InfoRequestMeta [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 InfoRequest [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 IndividualResponseResults [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 IndividualResponseContent [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 IndividualResponse [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 IndividualFields [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 HandoverType [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 Handover [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 GenomicVariantResponseContent [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 GenomicVariantResponse [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 GenomicVariantFields [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 Filters [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 FilteringTermResponseContent [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 FilteringTerm [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 DatasetResponseContent [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 DataUseConditions [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 CustomFilters [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 CohortResponseResults [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 CohortResponseContent [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 CohortResponse [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 CohortFields [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 Chromosome [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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Chromosome beacon ↗

{S}[B] Status [i]	implemented
Provenance	Beacon API
Used by	Beacon Progenetix database schema (Beacon+ backend)

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Bo Gao

Developer, Beacon project
PhD candidate in Bioinformatics
University of Zurich

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beacon-v2 BiosampleResponseResults [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 BiosampleResponseContent [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 BiosampleResponse [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 BiosampleFields [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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BeaconSnvRequest beacon ↗

{S}[B] Status [i]	proposed
Provenance	Beacon API
Used by	Beacon Progenetix database schema (Beacon+ backend)

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BeaconRangeRequest beacon ↗

{S}[B] Status [i]	proposal
Provenance	Beacon API
Used by	Beacon Progenetix database schema (Beacon+ backend)

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beacon-v2 BeaconOrganization [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 BeaconInfo [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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BeaconGenomicVariant beacon ↗

{S}[B] Status [i]	playground
Provenance	Original GA4GH schema Modifications for Beacon v2
Used by	Beacon, in modified form as basis for query model and for Beacon v2 response testing Progenetix database schema (Beacon+ backend)

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beacon-v2 BeaconError [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 BeaconDatasetAlleleResponse [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 BeaconDataset [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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BeaconCnvRequest beacon ↗

{S}[B] Status [i]	proposed
Provenance	Beacon API
Used by	Beacon Progenetix database schema (Beacon+ backend)

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BeaconAlleleRequest beacon ↗

{S}[B] Status [i]	implemented
Provenance	Beacon API
Used by	Beacon Progenetix database schema (Beacon+ backend)

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beacon-v2 Assembly [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 AnalysisResponseResults [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 AnalysisResponseContent [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 AnalysisResponse [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 AnalysisFields [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 AlternativeSchema [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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beacon-v2 AlternateBases [ ↗ ]

{S}[B] Status [i]	proposed
Provenance	Beacon v2 provisional / developer version
Used by	Progenetix database schema (Beacon+ backend)

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Pages tagged "Beacon"

Rahel Paloots

Michael Baudis

Marc Fiume

Bo Gao